STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_005469Myb-related protein B. (617 aa)    
Predicted Functional Partners:
D9C73_020613
Protein lin-52-like protein 12.5 kDa retinal tissue protein.
    
 0.993
D9C73_010201
Protein lin-9-like protein.
    
 0.981
D9C73_009674
Protein lin-9-like protein.
    
 0.981
D9C73_016015
Protein lin-37-like protein.
   
 0.980
D9C73_022643
Histone-binding protein RBBP4.
   
 0.949
D9C73_022680
Histone-binding protein RBBP4.
   
 0.949
D9C73_008134
Tesmin.
    
 0.911
D9C73_015980
Tesmin.
    
 0.911
D9C73_018214
Protein lin-54-like protein.
    
 0.911
D9C73_018207
Protein lin-54-like protein.
    
 0.911
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.