STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_006680Hyaluronan-mediated motility receptor. (1028 aa)    
Predicted Functional Partners:
D9C73_001687
Amyloid beta A4 protein ABPP.
    
 0.797
D9C73_001642
Amyloid beta A4 protein ABPP.
    
 0.797
D9C73_001685
Amyloid beta A4 protein ABPP.
    
 0.797
D9C73_014820
Amyloid-like protein 2.
    
 0.764
D9C73_021431
Enoyl-CoA delta isomerase 2, mitochondrial.
    
  0.740
D9C73_016021
Amyloid-like protein 2.
    
 0.720
D9C73_016025
Amyloid-like protein 2.
    
 0.720
D9C73_015125
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.675
D9C73_005339
Kinetochore protein.
   
 0.659
D9C73_017148
DNA repair protein RAD50.
   
 0.629
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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