STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (646 aa)    
Predicted Functional Partners:
D9C73_016851
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.962
D9C73_015839
39S ribosomal protein L32, mitochondrial.
  
 
 0.956
D9C73_025424
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.948
D9C73_022705
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.947
D9C73_025626
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.947
D9C73_014690
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.946
D9C73_015955
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
 
 
 0.933
D9C73_016423
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.930
D9C73_005294
28S ribosomal protein S16, mitochondrial.
  
 
 0.929
D9C73_024362
39S ribosomal protein L27, mitochondrial.
  
   0.923
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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