STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_006808Phospholipase D3. (869 aa)    
Predicted Functional Partners:
D9C73_018002
Phospholipase D2.
     
 0.853
D9C73_003336
Diacylglycerol kinase.
     
 0.843
D9C73_007112
Phosphatidylcholine-sterol acyltransferase.
   
 
 0.837
D9C73_008415
Phospholipase A2.
   
 
  0.834
D9C73_015934
Lysophospholipid acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
     
 0.834
D9C73_008636
Phospholipid phosphatase 2.
     
 0.830
D9C73_012883
Phospholipid phosphatase 1.
     
 0.830
D9C73_016354
Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family.
     
 0.830
D9C73_020952
Phospholipid phosphatase 2.
     
 0.829
D9C73_013575
Phospholipid phosphatase 3.
     
 0.829
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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