STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_006269ADP-ribosylation factor-like protein 13B. (390 aa)    
Predicted Functional Partners:
D9C73_018781
RAB6A-GEF complex partner protein 1.
    
 0.801
D9C73_014920
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.783
D9C73_014919
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.783
D9C73_008182
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
     
 0.752
D9C73_005059
Syntaxin-16; Belongs to the syntaxin family.
    
 0.747
D9C73_003507
Uncharacterized protein.
    
 0.736
D9C73_025137
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
0.736
D9C73_006492
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
0.732
D9C73_018795
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
0.732
D9C73_023949
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.732
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.