STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_007889TLD domain-containing protein 1 TBC/LysM-associated domain-containing protein 1. (463 aa)    
Predicted Functional Partners:
D9C73_002727
V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
   0.965
D9C73_027609
Putative E3 ubiquitin-protein ligase UBR7.
    
   0.961
D9C73_001803
ATPase H(+)-transporting lysosomal accessory protein 2.
    
   0.961
D9C73_009585
V-type proton ATPase subunit D.
    
   0.961
D9C73_014129
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
    
   0.961
D9C73_021854
V-type proton ATPase catalytic subunit A.
    
   0.961
D9C73_017525
Ribonuclease kappa-B.
    
 
 0.954
D9C73_027497
Ribonuclease kappa-A.
    
 
 0.949
D9C73_010582
V-type proton ATPase subunit S1.
    
   0.931
D9C73_010709
V-type proton ATPase subunit S1.
    
   0.931
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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