STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_009001Methyltransferase-like protein 13. (693 aa)    
Predicted Functional Partners:
D9C73_009004
Vesicle-associated membrane protein 4.
     
 0.882
D9C73_018219
Vesicle-associated membrane protein 3.
     
 0.819
D9C73_008995
Histone H2A deubiquitinase MYSM1.
    
 0.695
D9C73_009000
Dynamin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.643
D9C73_013581
Dynamin-3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.643
D9C73_016785
SWI/SNF complex subunit SMARCC1 BRG1-associated factor 155.
    
 0.623
D9C73_016788
SWI/SNF complex subunit SMARCC1 BRG1-associated factor 155.
    
 0.623
D9C73_023057
SWI/SNF complex subunit SMARCC1 BRG1-associated factor 155.
    
 0.623
D9C73_023071
SWI/SNF complex subunit SMARCC2 BRG1-associated factor 170.
    
 0.623
D9C73_004926
SWI/SNF complex subunit SMARCC2 BRG1-associated factor 170.
    
 0.623
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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