STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_009093Adapter protein CIKS. (448 aa)    
Predicted Functional Partners:
D9C73_028082
Muscle M-line assembly protein unc-89.
    
 0.896
D9C73_003589
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.871
D9C73_005236
Macrophage-stimulating protein receptor.
    
  0.806
D9C73_005410
Macrophage-stimulating protein receptor.
    
  0.806
D9C73_007972
Hepatocyte growth factor receptor.
    
  0.806
D9C73_020014
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.716
D9C73_022096
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
  0.699
D9C73_027877
T-cell surface glycoprotein CD3 zeta chain.
   
 0.673
D9C73_025360
Erythropoietin receptor.
    
 0.661
D9C73_012834
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.656
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.