STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_010066Ubiquitin-conjugating enzyme E2 J1. (306 aa)    
Predicted Functional Partners:
D9C73_007148
Transmembrane protein 189.
   
 0.996
D9C73_007150
Transmembrane protein 189.
   
 0.996
D9C73_015289
E3 ubiquitin-protein ligase TRIP12.
    
 0.914
D9C73_005698
Ubiquitin-conjugating enzyme E2 J2.
    
0.907
D9C73_010862
Adipolin Adipose-derived insulin-sensitizing factor.
    
 0.892
D9C73_001267
E3 SUMO-protein ligase.
   
 0.885
D9C73_020822
Fanconi anemia group M protein.
    
 0.882
D9C73_020820
Fanconi anemia group M protein.
    
 0.882
D9C73_021941
Ubiquitin-conjugating enzyme E2 W.
     
 0.862
D9C73_008427
L40 Ubiquitin 60S ribosomal protein.
   
 0.856
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.