STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_009928UBX domain-containing protein 2A. (246 aa)    
Predicted Functional Partners:
D9C73_003155
Tether containing UBX domain for GLUT4.
    
 0.994
D9C73_011114
NSFL1 cofactor p47 p97 cofactor p47.
  
 
 
0.991
D9C73_003067
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.987
D9C73_003094
Transitional endoplasmic reticulum ATPase.
   
 0.987
D9C73_012377
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.987
D9C73_013926
UBX domain-containing protein 7.
    
 
 0.979
D9C73_013949
UBX domain-containing protein 7.
    
 
 0.979
D9C73_008848
UBX domain-containing protein 6.
    
 0.977
D9C73_007537
Serine beta-lactamase-like protein LACTB, mitochondrial.
    
  0.968
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.958
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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