STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_010737Pleckstrin-like proteiny domain-containing family G member 5. (284 aa)    
Predicted Functional Partners:
D9C73_027817
Tumor necrosis factor TNF-alpha.
    
 0.956
D9C73_004187
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.954
D9C73_014003
Receptor-interacting serine/threonine-protein kinase 1.
   
 0.953
D9C73_003521
FAS-associated death domain protein FAS-associating death domain-containing protein.
   
 0.920
D9C73_012834
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.920
D9C73_023613
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
   
 0.893
D9C73_003589
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.883
D9C73_016596
Tumor necrosis factor TNF-alpha.
    
 0.879
D9C73_022076
Protein FAN.
    
 0.877
D9C73_019429
Tumor necrosis factor alpha-induced protein 3.
    
 0.859
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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