STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_011259Matrix metalloproteinase-23; Belongs to the peptidase M10A family. (465 aa)    
Predicted Functional Partners:
D9C73_008415
Phospholipase A2.
     
 0.758
D9C73_025802
Metalloproteinase inhibitor 2.
   
 0.635
D9C73_023947
Metalloproteinase inhibitor 2.
   
 0.625
D9C73_025261
Metalloproteinase inhibitor 3.
   
 0.617
D9C73_005307
Metalloproteinase inhibitor 4.
    
 0.612
D9C73_006653
EGF-like growth factor Heparin-binding.
    
  0.509
D9C73_022903
Collagen alpha-1(XXII) chain.
    
  0.505
D9C73_007337
Uncharacterized protein.
    
 0.497
D9C73_007338
Lymphatic vessel endothelial hyaluronic acid receptor 1.
    
 0.497
D9C73_010308
Syndecan-3.
    
  0.485
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.