STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_011921Nascent polypeptide-associated complex subunit alpha. (215 aa)    
Predicted Functional Partners:
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
D9C73_017089
60S ribosomal protein L23a.
   
 
 0.993
D9C73_018124
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.993
D9C73_001656
60S ribosomal protein L24.
   
   0.992
D9C73_006626
60S ribosomal protein L26.
  
 
 0.992
D9C73_007585
60S ribosomal protein L4-B L1B.
   
 
 0.992
D9C73_011830
60S ribosomal protein L32.
  
   0.992
D9C73_012839
60S ribosomal protein L6.
   
   0.992
D9C73_018472
60S ribosomal protein L7a.
   
   0.992
D9C73_021867
60S ribosomal protein L21.
   
   0.992
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.