STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_012570BDNF/NT-3 growth factors receptor. (533 aa)    
Predicted Functional Partners:
D9C73_004306
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
   
 0.905
D9C73_025241
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.899
D9C73_026352
Neurotrophin-4; Belongs to the NGF-beta family.
    
 0.886
D9C73_026285
Growth factor receptor-bound protein 2.
    
 0.881
D9C73_006092
Pro-epidermal growth factor.
   
 0.870
D9C73_028082
Muscle M-line assembly protein unc-89.
    
 0.869
D9C73_016198
Ephrin-A1 EPH-related receptor tyrosine kinase ligand 1; Belongs to the ephrin family.
    
 0.869
D9C73_023228
Ephrin-A1 EPH-related receptor tyrosine kinase ligand 1; Belongs to the ephrin family.
    
 0.869
D9C73_016196
Ephrin-A4 EPH-related receptor tyrosine kinase ligand 4; Belongs to the ephrin family.
    
 0.867
D9C73_007448
Hepatocyte growth factor Hepatopoietin-A; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.865
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.