STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_012450Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (603 aa)    
Predicted Functional Partners:
D9C73_027439
Amino acid transporter.
    
 0.779
D9C73_015923
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
0.746
D9C73_015928
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
0.746
D9C73_003424
Syntaxin-3; Belongs to the syntaxin family.
    
 0.708
D9C73_012083
Syntaxin-2 Epimorphin; Belongs to the syntaxin family.
    
 0.708
D9C73_015061
Syntaxin-1A Neuron-specific antigen HPC-1; Belongs to the syntaxin family.
    
 0.708
D9C73_004404
D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.688
D9C73_004497
D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.688
D9C73_007905
D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.688
D9C73_018862
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.663
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.