STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_012904Sesquipedalian-1. (295 aa)    
Predicted Functional Partners:
D9C73_006254
Inositol polyphosphate 5-phosphatase OCRL-1.
    
 
 0.976
D9C73_023971
Sesquipedalian-1.
  
 
  
0.722
D9C73_013175
Homeobox protein cut-like.
      
 0.516
D9C73_006297
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.509
D9C73_006705
SH2 domain-containing protein 1A.
    
 
 0.509
D9C73_006698
SH2 domain-containing protein 1A.
    
 
 0.509
D9C73_008897
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.
    
 
 0.509
D9C73_012708
72 kDa inositol polyphosphate 5-phosphatase.
    
 
 0.509
D9C73_012507
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A.
    
 
 0.509
D9C73_012506
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A.
    
 
 0.509
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.