STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_015000Hepatocyte nuclear factor 1-beta-A. (559 aa)    
Predicted Functional Partners:
D9C73_012028
Hepatocyte nuclear factor 1-alpha.
  
 
0.881
D9C73_013343
Pancreas transcription factor 1 subunit alpha.
     
 0.649
D9C73_017239
Pterin-4-alpha-carbinolamine dehydratase 2.
    
 
 0.599
D9C73_020048
Pterin-4-alpha-carbinolamine dehydratase.
    
 
 0.599
D9C73_010695
Hepatocyte nuclear factor 4-alpha.
   
 0.598
D9C73_022013
Hepatocyte nuclear factor 4-alpha.
   
 0.598
D9C73_022009
Hepatocyte nuclear factor 4-alpha.
   
 0.598
D9C73_021871
Pancreas/duodenum homeobox protein 1.
      
 0.491
D9C73_003919
One cut domain family member.
     
 0.470
D9C73_004220
Hepatocyte nuclear factor 4-beta.
   
 0.444
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.