STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_016599Large proline-rich protein BAG6. (1123 aa)    
Predicted Functional Partners:
D9C73_024243
Golgi to ER traffic protein 4-like protein.
    
 0.969
D9C73_012244
Ubiquitin-like protein 4A.
    
0.936
D9C73_006352
UBX domain-containing protein 1 SAPK substrate protein 1.
    
 
 0.912
ASNA1
ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]
    
 0.840
D9C73_008530
E3 ubiquitin-protein ligase RNF126.
    
 
 0.840
D9C73_013808
E3 ubiquitin-protein ligase RNF126.
    
 
 0.840
D9C73_006633
FAS-associated factor 2.
    
 
 0.810
D9C73_006615
FAS-associated factor 2.
    
 
 0.810
D9C73_024238
Desumoylating isopeptidase 1.
    
   0.806
D9C73_026098
Desumoylating isopeptidase 1.
    
   0.806
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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