STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_017749RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (386 aa)    
Predicted Functional Partners:
D9C73_004894
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
0.999
D9C73_011421
Actin-related protein 5; Belongs to the actin family.
    
 
 0.998
D9C73_006991
Actin-related protein 6; Belongs to the actin family.
    
 
 0.996
D9C73_008711
DNA methyltransferase 1-associated protein 1.
   
 0.995
D9C73_008734
BRG1-associated factor A Actin-related protein Baf53a; Belongs to the actin family.
   
 0.995
D9C73_023271
Vacuolar protein sorting-associated protein 72-like protein.
    
 0.992
D9C73_011396
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
 0.990
D9C73_000240
Nucleolar protein 58.
   
 
 0.989
D9C73_024172
Transformation/transcription domain-associated protein 350/400 kDa PCAF-associated factor; Belongs to the PI3/PI4-kinase family.
   
 0.986
D9C73_023599
Helicase domino.
   
 0.985
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.