STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_017822Calpain small subunit 1. (216 aa)    
Predicted Functional Partners:
D9C73_005627
Calpastatin Calpain inhibitor.
   
 0.947
D9C73_028142
Calpain-2 catalytic subunit; Belongs to the peptidase C2 family.
 
 
 0.886
D9C73_016735
Calpain-7; Belongs to the peptidase C2 family.
   
 0.828
D9C73_024045
Calpain-15; Belongs to the peptidase C2 family.
   
 0.804
D9C73_013839
Calpain-10; Belongs to the peptidase C2 family.
   
 0.756
D9C73_018086
Calpain-5; Belongs to the peptidase C2 family.
 
 
 0.724
D9C73_020467
Calpain-2 catalytic subunit; Belongs to the peptidase C2 family.
 
 
 0.718
D9C73_014708
Calpain-5; Belongs to the peptidase C2 family.
 
 
 0.712
D9C73_017294
Calpain-5; Belongs to the peptidase C2 family.
 
 
 0.705
D9C73_014686
Calpain-5; Belongs to the peptidase C2 family.
 
 
 0.700
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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