STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_019216Serine palmitoyltransferase 1. (472 aa)    
Predicted Functional Partners:
D9C73_019967
Serine palmitoyltransferase 3.
  
0.983
D9C73_009957
Serine palmitoyltransferase 2.
  
0.983
D9C73_020429
Serine palmitoyltransferase 2.
  
0.983
D9C73_019966
Isthmin-1.
   
 0.977
D9C73_009956
Isthmin-2.
   
 0.973
D9C73_020251
Small subunit of serine palmitoyltransferase.
    
 0.972
D9C73_003800
Bifunctional glutamate/proline--tRNA ligase.
   
 0.932
D9C73_001118
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.929
D9C73_010778
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.929
D9C73_023560
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.929
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.