STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_019116One cut domain family member. (505 aa)    
Predicted Functional Partners:
D9C73_020797
Origin recognition complex subunit 3.
    
 
 0.723
D9C73_019120
Cyclin-G2; Belongs to the cyclin family.
    
 
 0.617
D9C73_012736
Cyclin-G2.
    
 
 0.613
D9C73_018899
Serine/threonine-protein phosphatase.
   
  
 0.564
D9C73_019108
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.564
D9C73_019118
WD repeat-containing protein 7.
      
 0.561
D9C73_007345
Furin; Belongs to the peptidase S8 family.
      
 0.559
D9C73_004163
Furin-1; Belongs to the peptidase S8 family.
      
 0.558
D9C73_011830
60S ribosomal protein L32.
      
 0.556
D9C73_019212
Tyrosine-protein kinase.
      
 0.548
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.