STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_017437Magnesium transporter NIPA4. (400 aa)    
Predicted Functional Partners:
D9C73_017000
Dolichyl-phosphate beta-glucosyltransferase.
   
 
  0.612
D9C73_001718
UDP-glucuronic acid decarboxylase 1.
   
 
 0.595
D9C73_001739
UDP-glucuronic acid decarboxylase 1.
   
 
 0.595
D9C73_010193
Hydroperoxide isomerase ALOXE3.
      
 0.426
D9C73_017506
Hydroperoxide isomerase ALOXE3.
      
 0.426
D9C73_018631
Long-chain fatty acid transport protein 4; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.410
D9C73_006582
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating; Belongs to the 3-beta-HSD family.
     
 0.408
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.