STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_019944Transforming acidic coiled-coil-containing protein 2. (1184 aa)    
Predicted Functional Partners:
D9C73_008057
Cytoskeleton-associated protein 5.
    
 
 0.882
D9C73_008084
Cytoskeleton-associated protein 5.
    
 
 0.882
D9C73_006057
Bifunctional glyoxylate cycle protein.
   
 
 0.840
D9C73_006053
Malate synthase.
   
 
 0.840
D9C73_005902
Aurora kinase A-B; Belongs to the protein kinase superfamily.
   
 0.792
D9C73_006176
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.792
D9C73_006188
Aurora kinase B.
   
 0.792
D9C73_015371
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.754
D9C73_017754
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.754
D9C73_012832
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.754
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.