Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D9C73_000240 | D9C73_001898 | A0A4U5TWZ3 | A0A4U5TZ51 | Nucleolar protein 58. | U3 small nucleolar RNA-associated protein 14-like protein B. | 0.999 |
D9C73_000240 | D9C73_005279 | A0A4U5TWZ3 | A0A4U5UBF5 | Nucleolar protein 58. | Something about silencing protein 10. | 0.999 |
D9C73_000240 | D9C73_012321 | A0A4U5TWZ3 | A0A4V6AQ20 | Nucleolar protein 58. | Nucleolar protein 6. | 0.999 |
D9C73_000240 | D9C73_019596 | A0A4U5TWZ3 | A0A4U5VCS3 | Nucleolar protein 58. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. | 0.901 |
D9C73_000240 | D9C73_024392 | A0A4U5TWZ3 | A0A4U5VQ60 | Nucleolar protein 58. | BMS1-like protein Ribosome assembly protein. | 0.999 |
D9C73_001898 | D9C73_000240 | A0A4U5TZ51 | A0A4U5TWZ3 | U3 small nucleolar RNA-associated protein 14-like protein B. | Nucleolar protein 58. | 0.999 |
D9C73_001898 | D9C73_005279 | A0A4U5TZ51 | A0A4U5UBF5 | U3 small nucleolar RNA-associated protein 14-like protein B. | Something about silencing protein 10. | 0.999 |
D9C73_001898 | D9C73_012321 | A0A4U5TZ51 | A0A4V6AQ20 | U3 small nucleolar RNA-associated protein 14-like protein B. | Nucleolar protein 6. | 0.999 |
D9C73_001898 | D9C73_019596 | A0A4U5TZ51 | A0A4U5VCS3 | U3 small nucleolar RNA-associated protein 14-like protein B. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. | 0.895 |
D9C73_001898 | D9C73_024392 | A0A4U5TZ51 | A0A4U5VQ60 | U3 small nucleolar RNA-associated protein 14-like protein B. | BMS1-like protein Ribosome assembly protein. | 0.999 |
D9C73_005279 | D9C73_000240 | A0A4U5UBF5 | A0A4U5TWZ3 | Something about silencing protein 10. | Nucleolar protein 58. | 0.999 |
D9C73_005279 | D9C73_001898 | A0A4U5UBF5 | A0A4U5TZ51 | Something about silencing protein 10. | U3 small nucleolar RNA-associated protein 14-like protein B. | 0.999 |
D9C73_005279 | D9C73_012321 | A0A4U5UBF5 | A0A4V6AQ20 | Something about silencing protein 10. | Nucleolar protein 6. | 0.999 |
D9C73_005279 | D9C73_019596 | A0A4U5UBF5 | A0A4U5VCS3 | Something about silencing protein 10. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. | 0.941 |
D9C73_005279 | D9C73_024392 | A0A4U5UBF5 | A0A4U5VQ60 | Something about silencing protein 10. | BMS1-like protein Ribosome assembly protein. | 0.999 |
D9C73_005484 | D9C73_011014 | A0A4U5U9J1 | A0A4U5UPG8 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein G. | 0.999 |
D9C73_005484 | D9C73_012381 | A0A4U5U9J1 | A0A4V6AQ13 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. | 0.864 |
D9C73_005484 | D9C73_015373 | A0A4U5U9J1 | A0A4U5V1J7 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
D9C73_005484 | D9C73_019596 | A0A4U5U9J1 | A0A4U5VCS3 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. | 0.897 |
D9C73_005484 | D9C73_024756 | A0A4U5U9J1 | A0A4U5VQ53 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein F. | 0.999 |
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