STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_019336Zinc finger protein 3. (278 aa)    
Predicted Functional Partners:
D9C73_028082
Muscle M-line assembly protein unc-89.
    
  0.775
D9C73_010221
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.600
D9C73_009689
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.600
D9C73_001367
Thioredoxin domain-containing protein 3-like protein; Belongs to the NDK family.
    
 0.598
D9C73_001327
BRCA1-associated RING domain protein 1.
    
  0.588
D9C73_001324
BRCA1-associated RING domain protein 1.
    
  0.588
D9C73_019200
Putative ATP-dependent RNA helicase YTHDC2.
    
  0.550
D9C73_015688
Cytochrome b5 reductase 4.
    
  0.546
D9C73_021893
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.532
D9C73_016609
Ragulator complex protein LAMTOR2.
    
  0.507
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (26%) [HD]