STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_020300Perforin-1. (128 aa)    
Predicted Functional Partners:
D9C73_028082
Muscle M-line assembly protein unc-89.
   
 0.855
D9C73_009982
Platelet-activating factor acetylhydrolase.
     
 0.652
D9C73_002667
85/88 kDa calcium-independent phospholipase A2.
     
 0.648
D9C73_007112
Phosphatidylcholine-sterol acyltransferase.
   
 
 0.648
D9C73_004001
Intersectin-2 EH domain and SH3 domain regulator of endocytosis 2.
    
  0.636
D9C73_004007
Intersectin-2 EH domain and SH3 domain regulator of endocytosis 2.
    
  0.636
D9C73_009375
Intersectin-2 SH3 domain-containing protein 1B SH3P18 SH3P18-like WASP-associated protein.
    
  0.636
D9C73_009849
Intersectin-2 SH3 domain-containing protein 1B SH3P18 SH3P18-like WASP-associated protein.
    
  0.636
D9C73_019375
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
  0.636
D9C73_019358
Intersectin-1 SH3 domain-containing protein 1A SH3P17.
    
  0.636
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.