STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_021474Diamine acetyltransferase 1. (172 aa)    
Predicted Functional Partners:
D9C73_020294
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.928
D9C73_001757
N-acetylserotonin O-methyltransferase-like protein.
    
 0.893
D9C73_010870
Agmatinase, mitochondrial; Belongs to the arginase family.
  
 
 0.880
D9C73_000777
Amine oxidase.
     
 0.843
D9C73_019012
Amine oxidase.
     
 0.843
D9C73_022172
Amine oxidase.
     
 0.843
D9C73_025480
Amine oxidase.
     
 0.833
D9C73_027098
Diamine acetyltransferase 2.
  
  
 
0.831
D9C73_027088
Diamine acetyltransferase 2.
  
  
 
0.829
D9C73_013646
Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.
  
  0.775
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.