STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_021370Lysyl oxidase-like protein 3B. (1384 aa)    
Predicted Functional Partners:
D9C73_028082
Muscle M-line assembly protein unc-89.
   
  0.661
D9C73_015174
Uncharacterized protein.
    
 0.653
D9C73_020014
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.597
D9C73_005236
Macrophage-stimulating protein receptor.
    
  0.578
D9C73_005410
Macrophage-stimulating protein receptor.
    
  0.578
D9C73_007972
Hepatocyte growth factor receptor.
    
  0.578
D9C73_019985
AT-rich interactive domain-containing protein 4B.
    
 0.576
D9C73_012285
SMC5-SMC6 complex localization factor protein 1.
   
 0.572
D9C73_017770
Receptor-interacting serine/threonine-protein kinase 4.
   
  0.549
D9C73_017913
Receptor-interacting serine/threonine-protein kinase 4.
   
  0.549
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.