STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_023612Disintegrin and metalloproteinase domain-containing protein 8. (772 aa)    
Predicted Functional Partners:
D9C73_002294
Leucine-rich repeat LGI family member 2.
    
 0.576
D9C73_000119
Cadherin-1 Epithelial cadherin; Cadherins are calcium-dependent cell adhesion proteins.
    
  0.562
D9C73_012329
Ras GTPase-activating protein 1.
    
  0.562
D9C73_027221
Leucine-rich repeat LGI family member 2.
     
 0.531
D9C73_003393
SH3 and PX domain-containing protein 2A.
    
 0.488
D9C73_017183
SH3 and PX domain-containing protein 2B.
    
 0.488
D9C73_019614
SH3 and PX domain-containing protein 2A.
    
 0.488
D9C73_005246
Ephrin type-A receptor 2.
   
  0.485
D9C73_011312
Ephrin type-A receptor 2.
   
  0.485
D9C73_025522
Tumor necrosis factor receptor superfamily member 16.
     
 0.483
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.