STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_022290Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (569 aa)    
Predicted Functional Partners:
D9C73_005059
Syntaxin-16; Belongs to the syntaxin family.
    
 
 0.998
D9C73_011866
Rabenosyn-5.
    
 0.997
D9C73_023813
Vesicle transport through interaction with t-SNAREs-like protein 1A.
   
 
 0.983
D9C73_021234
Vesicle transport through interaction with t-SNAREs-like protein 1B.
   
 
 0.954
D9C73_004765
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
   0.920
D9C73_004174
Conserved oligomeric.
   
 
 0.911
D9C73_004702
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
 
      0.899
D9C73_001531
Conserved oligomeric.
     
 0.893
D9C73_023993
Protein MTO1-like protein, mitochondrial.
 
      0.891
D9C73_014920
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.877
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.