STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_023623Ankyrin-3. (3817 aa)    
Predicted Functional Partners:
D9C73_021431
Enoyl-CoA delta isomerase 2, mitochondrial.
    
  0.740
D9C73_015863
E3 ubiquitin-protein ligase rnf146.
    
 0.699
D9C73_015875
E3 ubiquitin-protein ligase rnf146.
    
 0.699
D9C73_002609
Axin-1 Axis inhibition protein 1.
    
 0.677
D9C73_003325
Axin-2 Axis inhibition protein 2.
    
 0.677
D9C73_025638
Axin-1 Axis inhibition protein 1.
    
 0.677
D9C73_003326
Uncharacterized protein.
    
 0.677
D9C73_008029
Spectrin beta chain, non-erythrocytic 2.
   
 0.649
D9C73_014742
Spectrin beta chain, non-erythrocytic 4.
   
 0.649
D9C73_018065
Spectrin beta chain, non-erythrocytic 1.
   
 0.649
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.