STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_024267Transcription factor. (365 aa)    
Predicted Functional Partners:
D9C73_014017
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.568
D9C73_018606
POU domain protein.
    
 0.557
D9C73_018624
POU domain protein.
    
 0.557
D9C73_017930
Brain-specific homeobox protein-like protein.
    
 0.514
D9C73_002369
Lymphoid enhancer-binding factor 1.
    
 0.506
D9C73_012205
Transcription factor 7-like 1-B HMG box transcription factor 3-B.
    
 0.506
D9C73_017224
Transcription factor 7-like 2 HMG box transcription factor 4 T-cell-specific transcription factor 4.
    
 0.506
D9C73_017223
Transcription factor 7-like 2 HMG box transcription factor 4 T-cell-specific transcription factor 4.
    
 0.506
D9C73_018138
Transcription factor 7-like 1-A HMG box transcription factor 3-A.
    
 0.506
D9C73_023809
Transcription factor 7-like 2 HMG box transcription factor 4 T-cell-specific transcription factor 4.
    
 0.506
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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