STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_025060Neuronal cell adhesion molecule. (1277 aa)    
Predicted Functional Partners:
D9C73_007748
Contactin-1a F3/F11/contactin.
    
0.915
D9C73_025059
Contactin-1a F3/F11/contactin.
    
0.915
D9C73_022122
Neuropilin; Belongs to the neuropilin family.
    
 0.823
D9C73_005383
Contactin-2 Axonin-1.
   
0.821
D9C73_005392
Contactin-2 Axonin-1; Belongs to the glycosyl hydrolase 18 family.
   
0.821
D9C73_014799
Contactin-5.
    
0.790
D9C73_027968
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.733
D9C73_027965
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.733
D9C73_028330
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.733
D9C73_028174
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.733
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.