STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_026522Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (495 aa)    
Predicted Functional Partners:
D9C73_023385
Chromatin modification-related protein MEAF6.
    
 0.944
D9C73_004894
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.931
D9C73_023596
Male-specific lethal 1-like protein.
    
 0.928
D9C73_024172
Transformation/transcription domain-associated protein 350/400 kDa PCAF-associated factor; Belongs to the PI3/PI4-kinase family.
   
 0.925
D9C73_008711
DNA methyltransferase 1-associated protein 1.
   
 0.904
D9C73_002873
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.896
D9C73_000366
Male-specific lethal 3-like protein.
    
 0.893
D9C73_021009
E3 ubiquitin-protein ligase MSL2.
    
 0.870
D9C73_021549
E3 ubiquitin-protein ligase MSL2.
    
 0.870
D9C73_003642
Mortality factor 4-like protein 1.
   
 0.854
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.