STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_027301Dynactin subunit 1. (328 aa)    
Predicted Functional Partners:
D9C73_005917
Dynactin subunit 2.
   
 0.992
D9C73_009897
Actin-related protein 10; Belongs to the actin family.
    
 0.988
D9C73_006646
Dynactin subunit 4.
    
 0.987
D9C73_026077
Dynactin subunit 5.
    
 0.984
D9C73_016744
Dynactin subunit 3.
   
 0.968
D9C73_016751
Dynactin subunit 3.
   
 0.968
D9C73_018144
Beta-centractin Actin-related protein 1B.
   
 0.960
D9C73_018141
Beta-centractin Actin-related protein 1B.
   
 0.960
D9C73_002171
Dynactin subunit 6.
    
 0.958
D9C73_004765
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.958
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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