STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_027192RNA-binding protein with multiple splicing. (194 aa)    
Predicted Functional Partners:
D9C73_027667
Protein quaking.
    
 
 0.730
D9C73_027666
Protein quaking-B.
    
 
 0.730
D9C73_027661
Protein quaking-B.
    
 
 0.730
D9C73_020842
Protein quaking-A.
    
 
 0.730
D9C73_023702
Protein quaking-B.
    
 
 0.730
D9C73_002149
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 
 0.629
D9C73_002118
RNA binding protein fox-1-like protein 2.
   
 
 0.629
D9C73_026271
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 
 0.629
D9C73_025329
RNA binding protein fox-1-like protein 1.
   
 
 0.629
D9C73_003963
RNA-binding motif protein 35B.
    
 
 0.583
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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