STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_026837Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (441 aa)    
Predicted Functional Partners:
D9C73_021453
Aspartyl/asparaginyl beta-hydroxylase.
   
 
 0.867
D9C73_010429
Triadin.
    
  0.858
D9C73_028101
Uncharacterized protein.
     
 0.808
D9C73_013368
Uncharacterized protein.
     
 0.808
D9C73_013369
Aspartyl/asparaginyl beta-hydroxylase.
     
 0.808
D9C73_010410
Uncharacterized protein.
   
 0.768
D9C73_010428
Triadin.
   
 0.768
D9C73_020897
Muscle M-line assembly protein unc-89.
   
 0.768
D9C73_020913
Uncharacterized protein.
   
 0.768
D9C73_000338
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.762
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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