STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_025754ADP-ribosylation factor-like protein 16. (150 aa)    
Predicted Functional Partners:
D9C73_028082
Muscle M-line assembly protein unc-89.
    
  0.775
D9C73_008182
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
    
  0.724
D9C73_010221
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.600
D9C73_009689
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.600
D9C73_001367
Thioredoxin domain-containing protein 3-like protein; Belongs to the NDK family.
    
 0.598
D9C73_001327
BRCA1-associated RING domain protein 1.
    
  0.588
D9C73_001324
BRCA1-associated RING domain protein 1.
    
  0.588
D9C73_010855
Ephrin type-B receptor 2.
    
 0.557
D9C73_019200
Putative ATP-dependent RNA helicase YTHDC2.
    
  0.550
D9C73_015688
Cytochrome b5 reductase 4.
    
  0.546
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.