STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_004926SWI/SNF complex subunit SMARCC2 BRG1-associated factor 170. (858 aa)    
Predicted Functional Partners:
D9C73_003861
Bromodomain-containing protein 7 75 kDa bromodomain protein.
   
 0.970
D9C73_003374
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
    
 0.965
D9C73_008734
BRG1-associated factor A Actin-related protein Baf53a; Belongs to the actin family.
    
 0.965
D9C73_025225
AT-rich interactive domain-containing protein 2.
   
 0.965
D9C73_025422
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
    
 0.965
D9C73_023714
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
    
 0.959
D9C73_005862
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
    
 0.955
D9C73_004044
PHD finger protein 10.
    
 0.951
D9C73_004027
PHD finger protein 10.
    
 0.951
D9C73_016089
Bromodomain-containing protein 9.
   
 0.939
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.