STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_011873Cysteine-rich with EGF-like domain protein 1. (369 aa)    
Predicted Functional Partners:
D9C73_028539
Interleukin-17F.
     
 0.767
D9C73_009995
Interleukin-17F.
     
 0.767
D9C73_017940
Hypoxia up-regulated protein 1.
   
 
 0.497
D9C73_017935
Hypoxia up-regulated protein 1.
   
 
 0.497
D9C73_013396
Ankyrin repeat domain-containing protein 45.
   
 
 0.417
D9C73_018824
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.417
D9C73_000760
DnaJ-like protein subfamily C member 10.
   
 
 0.413
D9C73_013065
Stromal cell-derived factor 2-like protein 1.
   
 
 0.413
D9C73_016951
Stromal cell-derived factor 2.
   
 
 0.413
D9C73_005727
Mannose-1-phosphate guanyltransferase beta.
   
  
 0.409
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.