STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_007551Transient receptor potential cation channel subfamily M member 1. (1682 aa)    
Predicted Functional Partners:
D9C73_001360
Transient receptor potential cation channel subfamily M member 2.
     
0.623
D9C73_010332
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_009575
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_013177
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_023977
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_026391
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_027405
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.604
D9C73_026018
ADP-ribose pyrophosphatase, mitochondrial.
 
   
 0.591
D9C73_020506
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.535
D9C73_027039
Non-lysosomal glucosylceramidase.
    
  0.526
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.