STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D9C73_027011Alpha-actinin-3 Alpha-actinin skeletal muscle isoform 3 F-actin cross-linking protein. (846 aa)    
Predicted Functional Partners:
D9C73_005796
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_005795
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_005794
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_010747
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_010746
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_010745
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_010875
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
  0.815
D9C73_016333
Zyxin.
   
 0.813
D9C73_019828
Vinculin Metavinculin.
   
 0.800
D9C73_019851
Vinculin Metavinculin.
   
 0.800
Your Current Organism:
Collichthys lucidus
NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker
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