Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC1G_00434 | CC1G_09106 | A8NXX7 | A8NJ54 | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | Karyopherin Kap95. | 0.951 |
CC1G_00434 | CC1G_10276 | A8NXX7 | A8N155 | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.951 |
CC1G_01173 | CC1G_01925 | A8NES1 | A8N5Z4 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RanBD1 domain-containing protein. | 0.923 |
CC1G_01173 | CC1G_02375 | A8NES1 | A8N7W8 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RCC1 domain-containing protein. | 0.999 |
CC1G_01173 | CC1G_03878 | A8NES1 | A8NH24 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Nuclear cap-binding protein subunit 2. | 0.908 |
CC1G_01173 | CC1G_09106 | A8NES1 | A8NJ54 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Karyopherin Kap95. | 0.996 |
CC1G_01173 | CC1G_09967 | A8NES1 | A8PGT3 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Cap binding protein 80-PB. | 0.908 |
CC1G_01173 | CC1G_10276 | A8NES1 | A8N155 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Importin subunit alpha; Belongs to the importin alpha family. | 0.940 |
CC1G_01173 | CC1G_12114 | A8NES1 | A8PHB6 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Importin alpha re-exporter. | 0.928 |
CC1G_01925 | CC1G_01173 | A8N5Z4 | A8NES1 | RanBD1 domain-containing protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.923 |
CC1G_01925 | CC1G_02375 | A8N5Z4 | A8N7W8 | RanBD1 domain-containing protein. | RCC1 domain-containing protein. | 0.472 |
CC1G_01925 | CC1G_03878 | A8N5Z4 | A8NH24 | RanBD1 domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.660 |
CC1G_01925 | CC1G_09106 | A8N5Z4 | A8NJ54 | RanBD1 domain-containing protein. | Karyopherin Kap95. | 0.717 |
CC1G_01925 | CC1G_09967 | A8N5Z4 | A8PGT3 | RanBD1 domain-containing protein. | Cap binding protein 80-PB. | 0.682 |
CC1G_01925 | CC1G_10276 | A8N5Z4 | A8N155 | RanBD1 domain-containing protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.912 |
CC1G_01925 | CC1G_12114 | A8N5Z4 | A8PHB6 | RanBD1 domain-containing protein. | Importin alpha re-exporter. | 0.446 |
CC1G_02375 | CC1G_01173 | A8N7W8 | A8NES1 | RCC1 domain-containing protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.999 |
CC1G_02375 | CC1G_01925 | A8N7W8 | A8N5Z4 | RCC1 domain-containing protein. | RanBD1 domain-containing protein. | 0.472 |
CC1G_02375 | CC1G_09106 | A8N7W8 | A8NJ54 | RCC1 domain-containing protein. | Karyopherin Kap95. | 0.702 |
CC1G_02375 | CC1G_10276 | A8N7W8 | A8N155 | RCC1 domain-containing protein. | Importin subunit alpha; Belongs to the importin alpha family. | 0.983 |
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