STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01925RanBD1 domain-containing protein. (689 aa)    
Predicted Functional Partners:
CC1G_11640
PARP catalytic domain-containing protein.
   
 
 0.975
CC1G_12190
Nuclear pore protein.
   
 
 0.973
CC1G_10523
Nucleoporin Nup157/170.
   
 
 0.970
CC1G_05762
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.969
CC1G_05470
Nuclear pore protein seh1; Belongs to the WD repeat SEC13 family.
   
 
 0.959
CC1G_00996
RanBP2-type domain-containing protein.
   
 0.954
CC1G_15467
Uncharacterized protein.
   
 
 0.943
CC1G_01173
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.923
CC1G_10276
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.912
CC1G_11206
Uncharacterized protein.
   
 
 0.907
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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