STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11552Signal transducer. (1191 aa)    
Predicted Functional Partners:
CC1G_10838
GTP binding protein Cdc42.
    
 0.998
CC1G_03305
Rho-GAP domain-containing protein.
   
 0.980
CC1G_05669
Signal transducer.
   
0.980
CC1G_06789
Uncharacterized protein.
    
 0.974
CC1G_06790
Small GTPase Rac1.
    
 0.974
CC1G_02026
Rho small monomeric GTPase.
    
 0.974
CC1G_02040
Uncharacterized protein.
    
 0.974
CC1G_05682
GTP-binding protein Rho3.
    
 0.974
CC1G_05706
Uncharacterized protein.
    
 0.974
CC1G_12487
Signal transducer.
    
 0.974
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.