STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02556Uncharacterized protein. (2344 aa)    
Predicted Functional Partners:
CC1G_12231
High-affinity cell membrane calcium channel.
    
 0.609
CC1G_12019
Phorbol-ester/DAG-type domain-containing protein.
  
 
   0.544
CC1G_00996
RanBP2-type domain-containing protein.
    
 0.415
CC1G_00668
UBA domain-containing protein 7.
    
 0.414
CC1G_13441
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.408
CC1G_07643
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.408
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.