STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03459RPN13_C domain-containing protein. (288 aa)    
Predicted Functional Partners:
CC1G_08234
Ubiquitin interaction domain-containing protein family protein.
   
 0.999
CC1G_03877
Rpt3-PA; Belongs to the AAA ATPase family.
   
 0.998
CC1G_07046
Endopeptidase; Belongs to the AAA ATPase family.
   
 0.998
CC1G_05324
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.998
CC1G_13483
Proteasome regulatory particle subunit.
   
 0.998
CC1G_13628
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.998
CC1G_09015
ATPase; Belongs to the AAA ATPase family.
   
 0.997
CC1G_02145
Proteasome 26S subunit.
   
 0.997
CC1G_10185
Proteasome regulatory subunit 12.
   
 0.997
CC1G_13955
PrsS7; Belongs to the AAA ATPase family.
   
 0.997
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
Server load: low (14%) [HD]