STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02930Uncharacterized protein. (394 aa)    
Predicted Functional Partners:
CC1G_01078
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.999
CC1G_06322
Methionyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.998
CC1G_01376
Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.991
CC1G_03229
Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.976
CC1G_11878
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.969
CC1G_02632
Tyrosine--tRNA ligase.
 
 
 0.967
CC1G_05260
Proline-tRNA ligase.
  
 0.954
CC1G_02312
Lysine--tRNA ligase.
  
 0.953
CC1G_09253
Uncharacterized protein.
   
 0.953
CC1G_06749
Aspartate-tRNA ligase.
  
 0.929
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.