STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01365SCF E3 ubiquitin ligase complex F-box protein grrA. (441 aa)    
Predicted Functional Partners:
CC1G_03801
F-box/WD repeat-containing protein pof1.
     
 0.920
CC1G_03943
F-box and WD repeat-containing protein.
    
 0.917
CC1G_01055
Ubiquitin-protein ligase.
    
 0.917
CC1G_13860
Cell division control protein 4.
    
 0.917
CC1G_01384
SCF E3 ubiquitin ligase complex F-box protein grrA.
  
  
 
0.906
CC1G_01383
SCF E3 ubiquitin ligase complex F-box protein grrA.
  
  
 
0.905
CC1G_06922
Nuclear distribution protein nudF.
     
 0.903
CC1G_08674
Rbx1 protein.
    
 0.846
CC1G_00882
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.768
CC1G_03473
Cullin-1; Belongs to the cullin family.
    
 0.737
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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